The Supreme Court ruled that strict compliance with the 120+30 day periods for claiming VAT (Value Added Tax) refunds is mandatory and jurisdictional. This means that taxpayers must file their judicial claims within 30 days of either receiving a denial from the Commissioner of Internal Revenue (CIR) or the expiration of the 120-day period for the CIR to act on their claim. Failure to comply with these deadlines results in the Court of Tax Appeals (CTA) losing jurisdiction over the case, regardless of the merit of the refund claim.
Missed Deadlines and Lost Millions: How M1’s VAT Refund Claim Was Derailed
Mindanao I Geothermal Partnership (M1) sought a tax credit certificate for unutilized excess input VAT, believing its sales qualified for VAT zero-rating under the Electric Power Industry Reform Act (EPIRA). After the Bureau of Internal Revenue (BIR) allegedly failed to act on its administrative claim, M1 elevated the matter to the CTA. The CTA initially denied M1’s petition but later granted a motion for a new trial, eventually ordering the BIR to issue a tax credit certificate. However, the Supreme Court reversed this decision, holding that M1’s judicial claim was filed out of time, thus depriving the CTA of jurisdiction.
The legal framework governing VAT refunds is primarily found in Section 112 of the National Internal Revenue Code (NIRC). This section outlines the procedural and temporal requirements for claiming excess input VAT refunds. Specifically, Section 112(D) states:
SEC. 112. Refunds or Tax Credits of Input Tax. —
(D) Period Within Which Refund or Tax Credit of Input Taxes Shall be Made. — In proper cases, the Commissioner shall grant a refund or issue the tax credit certificate for creditable input taxes within one hundred twenty (120) days from the date of submission of complete documents in support of the application filed in accordance with Subsection (A) and (B) hereof.
In case of full or partial denial of the claim for tax refund or tax credit, or the failure on the part of the Commissioner to act on the application within the period prescribed above, the taxpayer affected may, within thirty (30) days from the receipt of the decision denying the claim or after the expiration of the one hundred twenty day-period, appeal the decision or the unacted claim with the Court of Tax Appeals.
This provision establishes a strict timeline: the Commissioner has 120 days to act on a refund claim, and the taxpayer has 30 days from either receiving a denial or the lapse of the 120-day period to appeal to the CTA. The Supreme Court has consistently upheld the mandatory nature of these deadlines. The taxpayer’s failure to adhere to the 120+30 day rule is a fatal flaw to their claim.
M1 argued that the Aichi ruling, which emphasized strict compliance with the 120+30 day periods, should not apply retroactively to its case. They contended that they had relied on pre-Aichi interpretations that treated the 120+30 day period as merely permissive. The Supreme Court rejected this argument, citing the San Roque case, which explicitly stated that strict compliance with the 120+30 day periods is necessary for a claim to prosper, regardless of when the claim was filed.
To repeat, a claim for tax refund or credit, like a claim for tax exemption, is construed strictly against the taxpayer. One of the conditions for a judicial claim of refund or credit under the VAT System is compliance with the 120+30-day mandatory and jurisdictional periods. Thus, strict compliance with the 120+30 day periods is necessary for such a claim to prosper, whether before, during, or after the effectivity of the Atlas doctrine, except for the period from the issuance of BIR Ruling No. DA-489-03 on 10 December 2003 to 6 October 2010 when the Aichi doctrine was adopted, which again reinstated the 120+30 day periods as mandatory and jurisdictional.
In M1’s case, the administrative claim was filed on June 24, 2002. The 120-day period for the CIR to act on the claim lapsed on October 22, 2002. Therefore, M1 had until November 21, 2002, to appeal to the CTA. However, M1 filed its Petition for Review with the CTA on September 30, 2003 which is long after the deadline. Because of this, the Supreme Court ruled that the judicial claim was filed out of time, and the CTA lacked jurisdiction to hear the case.
The BIR’s delay in raising the issue of jurisdiction was deemed irrelevant. The Supreme Court has the power to take cognizance of a lack of jurisdiction at any point in the case. Jurisdiction is conferred by law, and the lack of it deprives the court of the authority to take cognizance of the action. While there is a concept of “jurisdiction by estoppel”, the facts of M1’s case did not satisfy the requirements of estoppel to prevent the Supreme Court from reversing the lower court’s decision.
The ruling underscores the importance of strict compliance with the timelines prescribed in Section 112 of the NIRC for VAT refund claims. Taxpayers must diligently monitor the progress of their administrative claims and ensure that they file their judicial claims within the prescribed 30-day period.
FAQs
What is the key issue in this case? | The key issue is whether the Court of Tax Appeals (CTA) had jurisdiction to entertain Mindanao I Geothermal Partnership’s (M1) claim for a tax credit certificate, given that the judicial claim was filed beyond the prescribed period under Section 112 of the National Internal Revenue Code (NIRC). |
What are the 120+30 day periods in VAT refund claims? | The 120-day period is the time the Commissioner of Internal Revenue (CIR) has to grant a VAT refund or issue a tax credit certificate. The 30-day period is the time the taxpayer has to appeal to the Court of Tax Appeals (CTA) after either receiving a denial from the CIR or the expiration of the 120-day period. |
What happens if a taxpayer files a judicial claim prematurely? | Premature filing is generally not allowed, but an exception existed for claims filed between December 10, 2003, and October 5, 2010, when BIR Ruling No. DA-489-03 was in effect. Otherwise, a premature claim can be dismissed. |
What happens if a taxpayer files a judicial claim late? | Late filing is absolutely prohibited, even during the time when BIR Ruling No. DA-489-03 was in force. The CTA will not acquire jurisdiction over the petition for review filed by the taxpayer and the claim will be dismissed. |
Can the BIR raise the issue of jurisdiction at any time? | Yes, the Supreme Court can take cognizance of a lack of jurisdiction at any point in the case, even if the BIR raises the issue belatedly. Jurisdiction is conferred by law, and its absence affects the court’s authority to render judgment. |
What is “jurisdiction by estoppel”? | “Jurisdiction by estoppel” is an exception to the general rule that lack of jurisdiction can be raised at any time. It applies when a party’s conduct prevents them from raising the issue of jurisdiction, typically due to significant delay or active participation in the proceedings. |
Does the Aichi ruling apply retroactively? | Yes, the Supreme Court has clarified that the Aichi ruling, which emphasized strict compliance with the 120+30 day periods, applies to claims filed before, during, and after the ruling’s effectivity, except for the period when BIR Ruling No. DA-489-03 was in force. |
What was the basis for the CTA’s initial decision in favor of M1? | The CTA initially ruled in favor of M1 after granting a motion for a new trial, during which M1 submitted additional documents supporting its claim for a tax credit certificate. |
Why did the Supreme Court reverse the CTA’s decision? | The Supreme Court reversed the CTA’s decision because M1’s judicial claim was filed beyond the 30-day period after the lapse of the 120-day period for the CIR to act on the administrative claim, thus depriving the CTA of jurisdiction. |
This case serves as a critical reminder of the stringent requirements for VAT refund claims. Taxpayers need to diligently adhere to the prescribed timelines to ensure their claims are not dismissed for procedural defects.
For inquiries regarding the application of this ruling to specific circumstances, please contact ASG Law through contact or via email at frontdesk@asglawpartners.com.
Disclaimer: This analysis is provided for informational purposes only and does not constitute legal advice. For specific legal guidance tailored to your situation, please consult with a qualified attorney.
Source: COMMISSIONER OF INTERNAL REVENUE vs. MINDANAO I GEOTHERMAL PARTNERSHIP, G.R. No. 192006, November 14, 2018